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GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes  (2018)

Authors:
Franceschini, Nora; Giambartolomei, Claudia; de Vries, Paul S; Finan, Chris; Bis, Joshua C; Huntley, Rachael P; Lovering, Ruth C; Tajuddin, Salman M; Winkler, Thomas W; Graff, Misa; Kavousi, Maryam; Dale, Caroline; Smith, Albert V; Hofer, Edith; van Leeuwen, Elisabeth M; Nolte, Ilja M; Lu, Lingyi; Scholz, Markus; Sargurupremraj, Muralidharan; Pitkänen, Niina; Franzén, Oscar; Joshi, Peter K; Noordam, Raymond; Marioni, Riccardo E; Hwang, Shih-Jen; Musani, Solomon K; Schminke, Ulf; Palmas, Walter; Isaacs, Aaron; Correa, Adolfo; Zonderman, Alan B; Hofman, Albert; Teumer, Alexander; Cox, Amanda J; Uitterlinden, André G; Wong, Andrew; Smit, Andries J; Newman, Anne B; Britton, Annie; Ruusalepp, Arno; Sennblad, Bengt; Hedblad, Bo; Pasaniuc, Bogdan; Penninx, Brenda W; Langefeld, Carl D; Wassel, Christina L; Tzourio, Christophe; Fava, Cristiano; Baldassarre, Damiano; O'Leary, Daniel H; Teupser, Daniel; Kuh, Diana; Tremoli, Elena; Mannarino, Elmo; Grossi, Enzo; Boerwinkle, Eric; Schadt, Eric E; Ingelsson, Erik; Veglia, Fabrizio; Rivadeneira, Fernando; Beutner, Frank; Chauhan, Ganesh; Heiss, Gerardo; Snieder, Harold; Campbell, Harry; Völzke, Henry; Markus, Hugh S; Deary, Ian J; Jukema, J Wouter; de Graaf, Jacqueline; Price, Jacqueline; Pott, Janne; Hopewell, Jemma C; Liang, Jingjing; Thiery, Joachim; Engmann, Jorgen; Gertow, Karl; Rice, Kenneth; Taylor, Kent D; Dhana, Klodian; Kiemeney, Lambertus A L M; Lind, Lars; Raffield, Laura M; Launer, Lenore J; Holdt, Lesca M; Dörr, Marcus; Dichgans, Martin; Traylor, Matthew; Sitzer, Matthias; Kumari, Meena; Kivimaki, Mika; Nalls, Mike A; Melander, Olle; Raitakari, Olli; Franco, Oscar H; Rueda-Ochoa, Oscar L; Roussos, Panos; Whincup, Peter H; Amouyel, Philippe; Giral, Philippe; Anugu, Pramod; Wong, Quenna; Malik, Rainer; Rauramaa, Rainer; Burkhardt, Ralph; Hardy, Rebecca; Schmidt, Reinhold; de Mutsert, Renée; Morris, Richard W; Strawbridge, Rona J; Wannamethee, S Goya; Hägg, Sara; Shah, Sonia; Mclachlan, Stela; Trompet, Stella; Seshadri, Sudha; Kurl, Sudhir; Heckbert, Susan R; Ring, Susan; Harris, Tamara B; Lehtimäki, Terho; Galesloot, Tessel E; Shah, Tina; de Faire, Ulf; Plagnol, Vincent; Rosamond, Wayne D; Post, Wendy; Zhu, Xiaofeng; Zhang, Xiaoling; Guo, Xiuqing; Saba, Yasaman; Dehghan, Abbas; Seldenrijk, Adrie; Morrison, Alanna C; Hamsten, Anders; Psaty, Bruce M; van Duijn, Cornelia M; Lawlor, Deborah A; Mook-Kanamori, Dennis O; Bowden, Donald W; Schmidt, Helena; Wilson, James F; Wilson, James G; Rotter, Jerome I; Wardlaw, Joanna M; Deanfield, John; Halcox, Julian; Lyytikäinen, Leo-Pekka; Loeffler, Markus; Evans, Michele K; Debette, Stéphanie; Humphries, Steve E; Völker, Uwe; Gudnason, Vilmundur; Hingorani, Aroon D; Björkegren, Johan L M; Casas, Juan P; O'Donnell, Christopher J
Title:
GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes
Year:
2018
Type of item:
Articolo in Rivista
Tipologia ANVUR:
Articolo su rivista
Language:
Inglese
Format:
A Stampa
Referee:
Name of journal:
NATURE COMMUNICATIONS
ISSN of journal:
2041-1723
N° Volume:
9
Number or Folder:
1
Page numbers:
5141-5154
Keyword:
atherosclerosis; intima media thickness; genetics
Short description of contents:
Carotid artery intima media thickness (cIMT) and carotid plaque are measures of subclinical atherosclerosis associated with ischemic stroke and coronary heart disease (CHD). Here, we undertake meta-analyses of genome-wide association studies (GWAS) in 71,128 individuals for cIMT, and 48,434 individuals for carotid plaque traits. We identify eight novel susceptibility loci for cIMT, one independent association at the previously-identified PINX1 locus, and one novel locus for carotid plaque. Colocalization analysis with nearby vascular expression quantitative loci (cis-eQTLs) derived from arterial wall and metabolic tissues obtained from patients with CHD identifies candidate genes at two potentially additional loci, ADAMTS9 and LOXL4. LD score regression reveals significant genetic correlations between cIMT and plaque traits, and both cIMT and plaque with CHD, any stroke subtype and ischemic stroke. Our study provides insights into genes and tissue-specific regulatory mechanisms linking atherosclerosis both to its functional genomic origins and its clinical consequences in humans.
Product ID:
105494
Handle IRIS:
11562/988483
Last Modified:
November 15, 2022
Bibliographic citation:
Franceschini, Nora; Giambartolomei, Claudia; de Vries, Paul S; Finan, Chris; Bis, Joshua C; Huntley, Rachael P; Lovering, Ruth C; Tajuddin, Salman M; Winkler, Thomas W; Graff, Misa; Kavousi, Maryam; Dale, Caroline; Smith, Albert V; Hofer, Edith; van Leeuwen, Elisabeth M; Nolte, Ilja M; Lu, Lingyi; Scholz, Markus; Sargurupremraj, Muralidharan; Pitkänen, Niina; Franzén, Oscar; Joshi, Peter K; Noordam, Raymond; Marioni, Riccardo E; Hwang, Shih-Jen; Musani, Solomon K; Schminke, Ulf; Palmas, Walter; Isaacs, Aaron; Correa, Adolfo; Zonderman, Alan B; Hofman, Albert; Teumer, Alexander; Cox, Amanda J; Uitterlinden, André G; Wong, Andrew; Smit, Andries J; Newman, Anne B; Britton, Annie; Ruusalepp, Arno; Sennblad, Bengt; Hedblad, Bo; Pasaniuc, Bogdan; Penninx, Brenda W; Langefeld, Carl D; Wassel, Christina L; Tzourio, Christophe; Fava, Cristiano; Baldassarre, Damiano; O'Leary, Daniel H; Teupser, Daniel; Kuh, Diana; Tremoli, Elena; Mannarino, Elmo; Grossi, Enzo; Boerwinkle, Eric; Schadt, Eric E; Ingelsson, Erik; Veglia, Fabrizio; Rivadeneira, Fernando; Beutner, Frank; Chauhan, Ganesh; Heiss, Gerardo; Snieder, Harold; Campbell, Harry; Völzke, Henry; Markus, Hugh S; Deary, Ian J; Jukema, J Wouter; de Graaf, Jacqueline; Price, Jacqueline; Pott, Janne; Hopewell, Jemma C; Liang, Jingjing; Thiery, Joachim; Engmann, Jorgen; Gertow, Karl; Rice, Kenneth; Taylor, Kent D; Dhana, Klodian; Kiemeney, Lambertus A L M; Lind, Lars; Raffield, Laura M; Launer, Lenore J; Holdt, Lesca M; Dörr, Marcus; Dichgans, Martin; Traylor, Matthew; Sitzer, Matthias; Kumari, Meena; Kivimaki, Mika; Nalls, Mike A; Melander, Olle; Raitakari, Olli; Franco, Oscar H; Rueda-Ochoa, Oscar L; Roussos, Panos; Whincup, Peter H; Amouyel, Philippe; Giral, Philippe; Anugu, Pramod; Wong, Quenna; Malik, Rainer; Rauramaa, Rainer; Burkhardt, Ralph; Hardy, Rebecca; Schmidt, Reinhold; de Mutsert, Renée; Morris, Richard W; Strawbridge, Rona J; Wannamethee, S Goya; Hägg, Sara; Shah, Sonia; Mclachlan, Stela; Trompet, Stella; Seshadri, Sudha; Kurl, Sudhir; Heckbert, Susan R; Ring, Susan; Harris, Tamara B; Lehtimäki, Terho; Galesloot, Tessel E; Shah, Tina; de Faire, Ulf; Plagnol, Vincent; Rosamond, Wayne D; Post, Wendy; Zhu, Xiaofeng; Zhang, Xiaoling; Guo, Xiuqing; Saba, Yasaman; Dehghan, Abbas; Seldenrijk, Adrie; Morrison, Alanna C; Hamsten, Anders; Psaty, Bruce M; van Duijn, Cornelia M; Lawlor, Deborah A; Mook-Kanamori, Dennis O; Bowden, Donald W; Schmidt, Helena; Wilson, James F; Wilson, James G; Rotter, Jerome I; Wardlaw, Joanna M; Deanfield, John; Halcox, Julian; Lyytikäinen, Leo-Pekka; Loeffler, Markus; Evans, Michele K; Debette, Stéphanie; Humphries, Steve E; Völker, Uwe; Gudnason, Vilmundur; Hingorani, Aroon D; Björkegren, Johan L M; Casas, Juan P; O'Donnell, Christopher J, GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes «NATURE COMMUNICATIONS» , vol. 9 , n. 12018pp. 5141-5154

Consulta la scheda completa presente nel repository istituzionale della Ricerca di Ateneo IRIS

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